CDS
| Accession Number | TCMCG072C13788 |
| gbkey | CDS |
| Protein Id | XP_021848590.1 |
| Location | join(355056..355323,357805..357852,357949..359470,359543..359702,360249..360320,360691..360874,361946..362229,362328..362471,365614..365688,365799..365870,366210..366325,368362..368510,368949..369171,369283..369580,370999..371141,371443..371605,372693..372828,373213..373358,373460..373699) |
| Gene | LOC110788260 |
| GeneID | 110788260 |
| Organism | Spinacia oleracea |
Protein
| Length | 1480aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA396054 |
| db_source | XM_021992898.1 |
| Definition | probable RNA-dependent RNA polymerase 5 isoform X1 [Spinacia oleracea] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGTCTGTCACACCGCCTGAACTTCCGCCGTTGCCGGAAGCGGTGGAAGAGCAACTCCGTCTTATTTGCCGCGTTAAATCGCAACCTCCGGCAGACACTGTTGCTAGACGACTCTTATCGGAAGTCGGCGAGCAAGAATCGTTGAGGTTTCTTAATATCATCCTTAATTCATCTGAAGTTAAAACTTTGAGCGGCTTTATTGTTTATTTGGTGAAGAAGAATCGCCCGCTCCCGACTTCTCCTTTGGCTGTAGCCAAGAGTCCTCAAGGGACTACAATGAGTGATAATAAGCGAAAGATGGAATCAGACTCTCCTGGTGATCGAAGTAATGTAAGGCGGGTGTGGATGTATAACTCACCAATTAAGAATGAAAAGAGGCTTGATTCGCCGAAAAGTGAACCTGATAGTGTATTGGATGCACCTGATCAAAGTACAGTAAGGCGGGTTTGTATCTATAACTCACCGACTAGGATTGAAGAGAAGCTTGATCCGCCAAAAAGTGAACCTGATAGTGTGCTGGTTACACCTGATCAAAGTACAGTAAGGCGGGTGTATATGTATAACTCACCGACTAGGATTGAAGAGAGGCTTGATCCGCTGAAAAATGAACCTGACAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGGGTGTGTATCTATAACTCACCGACTAGGATTGAAAAGAGGCTTGATCCGCCGAAATATGAACCTGACAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGGGTGTGTATTTATAACTTACCGACTAGGATTGAAGAGAGGCTTGATCCGCCGAAAAATGAACCTGACAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGTGTGTGTATCTATAACTCACCGACTAGGATTGAAGAGAGGCTTGATCCGCCGAAAAATGAACCTGACAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGGGGGTGTATGTATAACTCACCGAATAGGATTGAAGAGAGGCTTGATCCGCCAAAAAATGAACCTGGCAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGTGTGTGTATCTATAACTCACCGACTAGGATTGAAGAGAGGCTTGATCCGCCGAAAAATGAACCTGACAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGGGTGTGTATGTATAACTCACCGAATAGGATTGAAGAGAGGCTTGATCCGCCAAAAAATGAACCTGGCAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGTGTGTGTATCTATAACTCACCGACTAGGATTGAAGAGAGGCTTGATCCGCCGAAAAATGAACCTGACAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGTGTGTGTATCTATAACTCACCGACTAGGATTGAAGAGAGGCTTGATCCGCCGAAAAATGAACCTGACAGTGTGTTGCTTGCACCTGATCAAAGTACAGTAAGGCGGGTGTGTATCTATAACTCACCGACTAGGATTGAAGGGAGGCTTGATCTGCCGAAAAGTGAACCTGGTAGTATGTCGGTTACACCTGATCAAAGTACAGTAAGGCGGGTGTGTATCTATAACTCACCGGCTAGGATTGAAGAGAGGCTTGATCTGCCGAAAAGTGAACCTGGTAGTGTGTTGGTTGCACCTGATCAGAGTACTGTAAGGCGGGTGTGTATCTCTAACTCGTCGATTAAGATTGAAGAGAGGCTTGATCCGCTGAAAAGTGAAACTGATAGAGTGTTAGATGCACTTAAGAGACTTGAATTCCGAAAGGCTTTCTTACTTTTGAATTACTCAGGGCGTACCAATCTGGAGGATGTTGTTTCTACCCTCTCTGCTGATGAAATTCTGAGTTATCAAAGACTTGGTTGTCTTGGTATGAGGGAATTCGAGATCAGGATTTGGAATGACTTTGGGAGAGGGCCGAGACGCATTTGCCATGAAAAAGAGCGGATTAATAAGATGAACTGGGACACTGGAGAAAGGTACAACTACCATTGTCATATTGATTCAAGAGGGAATTGTCGCTTTAAGGGTCCATATCTGAACAAGGAAGCTACACTGTTGCAGAAAGTTGCTGGAGATGAAAATGTACTGGTAGTGAAGTTTCTGGAGGAAGAAACAGCGAATCTAGGAGCAGAGTTGATGAAAAATCCGGTCTTTAATGAGGTTGCTGAACATGGAATTTTTTTTGGCAGAAAGTGTTACCAGTTCTTTGTTTTTAAAGACGGGGGCAAGGAGGGTAAGAAGAAAGAATTTTCTAGTCCAGTTAAATGCTACTTTGTTTGTACGGAGGGCTTTGCTAGTATTTTAAGGAAGCCTGCTCATGAGTTGAGAAAAATGCCGGTTCCAGAAGCCAGGGGATTGTTCATGCACATACATAATGCATCCAGTATATCCAACTATATGGCCAGGTTTTCTCTTATATTGTCAAAAACCATTACCTTGGATCTTAATTTCAATGATGTACGTGTTGAAGTCCTTGAGGATATACCGTGTCTGGATGAAGATGGAAACATTGTTAAAGGTAATGATGGAAAGGCTTTGATTCTTACTGACGGGACTGGTTTTATCTCTGAAGATCTTGCGATGAAGTGCCCCCATAATTGTATTAATGGCCGTGTTAATAATGAAGAGGATATCCAGGGATCTTCAGAAACCTGCCGATTCCAGCCCGACTTTTCTGGATTAAGGGAGTTGAAATCTCCATCACGTGTACCGCCTTTGCTGATACAATTTCGCATGTTCCATGAAGGTCGGGCTATCAAAGGAACTGTTCTTGTGAACAAAAAGCTTCCTCCTAATACAATTCAAGTTCGCCGTTCTATGGTAAAAGTTGATAAACCTGGTGACGATAAAATTCCTTCAGGTGCTCCAATTGTGAATTCATTTGAAGTTGTGGGAACCAGCAATAAGCCAAAGATGGCCTCTCTGTCAAAGAATTTGATTGCACTTCTACACTATGGAGGGGTACCGAAGAATTTTTTTTTATCTCTGCTGTCAGAGGCTCTTGAAAAACAGCTGGCTATTCTGTATAAACCAAAAGCAGCCATAAGAGTTGCTGTTAATTGGGATTTTGGTGGAGATTTTATAGAGGCTAAAATGATTGCGTCTGGAATTCCCCTGGATGAGCCTTACCTTCAAGACCGTTTATTTGATATTGCCAAAGAGGAAATGAAGAGTCTTAAAGGAGGGAAATTGTTTGTTGATGGCTGTCACTATGTAATAGGAACAGCTGATCCTACGGGGATTCTGAATAGAGGCGAAGTTTGTGTTATTCTGCTCTTAAAAGCTATGGTGTCTTCGTCATTTACTGCATCTCCTCGCACAATGATTTTTCTCTGCTTATCTAGGGACGATGGACAAGTTTCTGGGCCAGTATTAGTCTATAGAAATCCAGGCACTCATCCGGGGGATATACATGTTGTGAATGCAAGATATGTCGGTGCCTTAAAGGAAATTGTGGGAAATTCTAAATATGGAATTTTTTTTCCTTCTAAGGGGCCAAGGTCAATGGCAGATGAAATAGCCGGTGGTGATTATGATGGAGATACGTATTGGGTGTCCACAAATTTTGAGCTGTTAGAACATTTCAAACCAAGTGAGCCTTGGAAATGTTCAACTGGTTCCCCGAATGTCAACAAAGTAGCAGGTCTGCCATCTGCTGGGGCATTGGAGCGAGATCTGTTTCGTTTATACTTGACTACTAGGTTTCAATCGAGTAATGCTATGGGTATAGCAGCAGATAGCTGGCAAGTGTATATGGATCGAATGTTGACACTGGGAGATGACTGCGCAGGTGAAAAAGCTGCTTTAAAGCAGAAAATGGATGAGTTAATTGACATATACTATGATGCACTGGATGCACCAAAAAAGGGAAGAAAGGTTGTGGTTCCCAACCGACTGATACCGGAAATGTATCCGCATCATATGGGAAGAGCAGAACATTGCACCTATAAATCCAAGTCTATTTTGGGTGAAATTTATGACACAGTGGACCAATTTAATGCTCCAATTCCATTTTGGAAGATAGAATGCTTTAATGCAGAAATTCCAGAAACGCACCTCGCACTGTGGAGAAAACATTACTCTACTTACAGAAGTGATATGCAGAGGGCTCTTAACGGATATGGAAACACAGCTGCAGTTTATCAGAAATACCGAAATGAACTCTATGGCGGTGTTGATGCATTGGACTTGAGTGAAAAAGATTTGGAAGAGATTCGACTCGAGGCCTTGGCGATATATCATGTATGCTATGACTATGCAGATATGGTAGGTGACCTTAAGAAATGTGGCTTTGCTTGGAAAGTTGCTGGGGATGCCTTGTGTAAGATATATTTGCGGAGTAAGAGTGACAAACCAATATTGTTTGCTCCTTCGGTTGTCAGCCAGATGATGCGTTAG |
| Protein: MSVTPPELPPLPEAVEEQLRLICRVKSQPPADTVARRLLSEVGEQESLRFLNIILNSSEVKTLSGFIVYLVKKNRPLPTSPLAVAKSPQGTTMSDNKRKMESDSPGDRSNVRRVWMYNSPIKNEKRLDSPKSEPDSVLDAPDQSTVRRVCIYNSPTRIEEKLDPPKSEPDSVLVTPDQSTVRRVYMYNSPTRIEERLDPLKNEPDSVLLAPDQSTVRRVCIYNSPTRIEKRLDPPKYEPDSVLLAPDQSTVRRVCIYNLPTRIEERLDPPKNEPDSVLLAPDQSTVRRVCIYNSPTRIEERLDPPKNEPDSVLLAPDQSTVRRGCMYNSPNRIEERLDPPKNEPGSVLLAPDQSTVRRVCIYNSPTRIEERLDPPKNEPDSVLLAPDQSTVRRVCMYNSPNRIEERLDPPKNEPGSVLLAPDQSTVRRVCIYNSPTRIEERLDPPKNEPDSVLLAPDQSTVRRVCIYNSPTRIEERLDPPKNEPDSVLLAPDQSTVRRVCIYNSPTRIEGRLDLPKSEPGSMSVTPDQSTVRRVCIYNSPARIEERLDLPKSEPGSVLVAPDQSTVRRVCISNSSIKIEERLDPLKSETDRVLDALKRLEFRKAFLLLNYSGRTNLEDVVSTLSADEILSYQRLGCLGMREFEIRIWNDFGRGPRRICHEKERINKMNWDTGERYNYHCHIDSRGNCRFKGPYLNKEATLLQKVAGDENVLVVKFLEEETANLGAELMKNPVFNEVAEHGIFFGRKCYQFFVFKDGGKEGKKKEFSSPVKCYFVCTEGFASILRKPAHELRKMPVPEARGLFMHIHNASSISNYMARFSLILSKTITLDLNFNDVRVEVLEDIPCLDEDGNIVKGNDGKALILTDGTGFISEDLAMKCPHNCINGRVNNEEDIQGSSETCRFQPDFSGLRELKSPSRVPPLLIQFRMFHEGRAIKGTVLVNKKLPPNTIQVRRSMVKVDKPGDDKIPSGAPIVNSFEVVGTSNKPKMASLSKNLIALLHYGGVPKNFFLSLLSEALEKQLAILYKPKAAIRVAVNWDFGGDFIEAKMIASGIPLDEPYLQDRLFDIAKEEMKSLKGGKLFVDGCHYVIGTADPTGILNRGEVCVILLLKAMVSSSFTASPRTMIFLCLSRDDGQVSGPVLVYRNPGTHPGDIHVVNARYVGALKEIVGNSKYGIFFPSKGPRSMADEIAGGDYDGDTYWVSTNFELLEHFKPSEPWKCSTGSPNVNKVAGLPSAGALERDLFRLYLTTRFQSSNAMGIAADSWQVYMDRMLTLGDDCAGEKAALKQKMDELIDIYYDALDAPKKGRKVVVPNRLIPEMYPHHMGRAEHCTYKSKSILGEIYDTVDQFNAPIPFWKIECFNAEIPETHLALWRKHYSTYRSDMQRALNGYGNTAAVYQKYRNELYGGVDALDLSEKDLEEIRLEALAIYHVCYDYADMVGDLKKCGFAWKVAGDALCKIYLRSKSDKPILFAPSVVSQMMR |